Home Research Feeds Variations in early gut microbiome are associated with childhood eczema

Variations in early gut microbiome are associated with childhood eczemaOriginal paper

Researched by:

  • Karen Pendergrass

Last Updated: 2026-07-04

Karen Pendergrass
Karen Pendergrass

Karen Pendergrass is a microbiome researcher specializing in microbiome-targeted interventions (MBTIs). She systematically analyzes scientific literature to identify microbial patterns, develop hypotheses, and validate interventions. As the founder of the Microbiome Signatures Database, she bridges microbiome research with clinical practice. In 2012, based on her own investigative research, she became the first documented case of FMT for Celiac Disease, four years before the first published case study.

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Location
China
Sample Site
Feces
Species
Homo sapiens

What was studied?

This study examined the relationship between gut microbiome composition and childhood eczema using 16S rRNA gene sequencing. Researchers compared microbial profiles between healthy children and children with eczema, stratifying samples into four age groups (0-0.5, 0.5-1, 1-2, and 2-3 years) to account for developmental and environmental influences on the gut microbiome. Findings from sequencing were further verified using quantitative polymerase chain reaction targeting Bifidobacterium and Bacteroides.

Who was studied?

The cohort included 172 subjects under age three, divided into a healthy group of 123 children and an eczema group of 49 children. Samples were further split across four narrower age brackets to examine how the microbiome-eczema relationship changed over early development. No further demographic or geographic details were given in the abstract.

What were the most important findings?

Lower relative abundance of Bifidobacterium was associated with childhood eczema, though this difference was not significant in infants younger than six months old. From 0.5 to 3 years of age, decreased Bifidobacterium was a major and consistent finding in the eczema group compared to age-matched healthy controls. Decreased microbial diversity was also observed in eczema samples across all age groups, most significantly in children aged 2-3 years. Bifidobacterium operational taxonomic units showed strong predictive power for eczema status, with a Random Forest model achieving an AUC of 0.83 in ROC analysis.

What are the greatest implications of this study?

The findings suggest that reduced Bifidobacterium levels in the gut, emerging after the first six months of life, may be linked to the development of childhood eczema. Because Bifidobacterium abundance showed high predictive accuracy for eczema status, it may serve as a candidate microbial marker for risk assessment in early childhood. The age-stratified design also indicates that timing matters: the microbiome-eczema association strengthens as children move past infancy, pointing to a developmental window relevant to future preventive or diagnostic strategies.

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