Home Research Feeds Healthy infants harbor intestinal bacteria that protect against food allergy

Healthy infants harbor intestinal bacteria that protect against food allergyOriginal paper

Researched by:

  • Karen Pendergrass

Last Updated: 2026-07-04

Karen Pendergrass
Karen Pendergrass

Karen Pendergrass is a microbiome researcher specializing in microbiome-targeted interventions (MBTIs). She systematically analyzes scientific literature to identify microbial patterns, develop hypotheses, and validate interventions. As the founder of the Microbiome Signatures Database, she bridges microbiome research with clinical practice. In 2012, based on her own investigative research, she became the first documented case of FMT for Celiac Disease, four years before the first published case study.

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Location
United States of America
Sample Site
Feces
Species
Mus musculus

What was studied?

This study examined whether commensal intestinal bacteria from human infants can regulate allergic responses to food. Researchers colonized germ-free mice with fecal bacteria from either healthy infants or infants with cow's milk allergy (CMA). They then compared the mice's susceptibility to anaphylactic reactions against a cow's milk allergen, along with differences in bacterial composition and ileal gene expression between the two groups.

Who was studied?

The human component involved fecal samples from healthy infants and infants diagnosed with cow's milk allergy, used as donor material for colonization. The abstract does not give an exact number of infant donors. The bulk of the experimental work was carried out in germ-free mice colonized with these human-derived bacterial communities.

What were the most important findings?

Mice colonized with bacteria from healthy infants were protected against anaphylactic responses to a cow's milk allergen, while mice colonized with bacteria from CMA infants were not. Bacterial composition clearly separated the healthy and CMA groups in both the original infant donors and the colonized mice. The two groups of colonized mice also showed distinct ileal epithelial transcriptome signatures, and correlating bacterial taxa with these gene expression changes identified the clostridial species Anaerostipes caccae as linked to protection against the allergic response.

What are the greatest implications of this study?

The findings show that specific intestinal bacteria, rather than the microbiome in general, are critical for regulating allergic responses to food in early life. Identifying Anaerostipes caccae as a protective species suggests a concrete, testable target for interventions aimed at preventing or treating food allergy. This supports the broader hypothesis that early-life disruptions to gut bacterial communities, from factors such as antibiotic use, diet, Caesarean birth, or formula feeding, may contribute to the rising prevalence of food allergy.

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