Home Research Feeds Alterations in gut microbiota and metabolite profiles in patients with infantile cholestasis

Alterations in gut microbiota and metabolite profiles in patients with infantile cholestasisOriginal paper

Researched by:

  • Karen Pendergrass

Last Updated: 2026-07-04

Karen Pendergrass
Karen Pendergrass

Karen Pendergrass is a microbiome researcher specializing in microbiome-targeted interventions (MBTIs). She systematically analyzes scientific literature to identify microbial patterns, develop hypotheses, and validate interventions. As the founder of the Microbiome Signatures Database, she bridges microbiome research with clinical practice. In 2012, based on her own investigative research, she became the first documented case of FMT for Celiac Disease, four years before the first published case study.

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Location
China
Sample Site
Feces
Species
Homo sapiens

What was studied?

This study examined the gut microbiota composition and microbiota-derived metabolite profiles in infants with infantile cholestasis (IC), the most common hepatobiliary disease in this age group. Because hepatointestinal circulation links the gut to bile acid and bilirubin metabolism, the researchers looked for microbial changes that accompany elevated direct bilirubin levels in IC. They also examined correlations between specific gut bacteria and circulating fatty acid and amino acid levels. The goal was to identify abnormal metabolite signatures associated with the altered microbiota in IC.

Who was studied?

The study compared infants diagnosed with infantile cholestasis (the IC group) to healthy infants (the CON group). The abstract does not provide a specific sample size, age range, or recruitment site, so these details cannot be stated. Based on the described comparison, this appears to be a case-control study of infants with IC versus matched healthy infant controls.

What were the most important findings?

Infants with IC had higher abundances of Veillonella, Streptococcus, and Clostridium species, and lower abundances of Ruminococcus, Vibrio butyricum, the Eubacterium coprostanogenes group, Intestinibacter, and Faecalibacterium compared to healthy infants. Metabolite analysis showed increased levels of fatty acids (palmitoleic, alpha-linolenic, arachidonic, and linoleic acid) and decreased amino acid levels in the IC group. Ruminococcus, the Eubacterium coprostanoligenes group, Intestinibacter, and Butyrivibrio were positively correlated with proline, asparagine, and aspartic acid, but negatively correlated with alpha-linolenic, linoleic, palmitoleic, and arachidonic acid. The abstract also references an analysis relating microbiota to clinical indices, though the specific results of that comparison are cut off and cannot be reported.

What are the greatest implications of this study?

These findings suggest that infantile cholestasis is associated with a distinct gut microbial signature marked by depletion of butyrate-associated and short-chain fatty acid producing taxa such as Faecalibacterium and Ruminococcus. The coordinated shifts in fatty acid and amino acid metabolites alongside these microbial changes point to gut microbiota as a potential contributor to, or biomarker of, disrupted bile acid and lipid metabolism in IC. This raises the possibility that microbiota-targeted approaches could eventually be explored as adjuncts in understanding or managing infantile cholestasis, pending further mechanistic and clinical study.

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