The antibacterial lectin RegIIIγ promotes the spatial segregation of microbiota and host in the intestine Original paper

Researched by:

  • Divine Aleru ID
    Divine Aleru

    User avatarI am a biochemist with a deep curiosity for the human microbiome and how it shapes human health, and I enjoy making microbiome science more accessible through research and writing. With 2 years experience in microbiome research, I have curated microbiome studies, analyzed microbial signatures, and now focus on interventions as a Microbiome Signatures and Interventions Research Coordinator.

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January 5, 2026

  • Microbes
    Microbes

    Microbes are microscopic organisms living in and on the human body, shaping health through digestion, vitamin production, and immune protection. When microbial balance is disrupted, disease can occur. This guide explains key microbe types—bacteria, viruses, fungi, protozoa, and archaea—plus major pathogenic and beneficial examples.

Researched by:

  • Divine Aleru ID
    Divine Aleru

    User avatarI am a biochemist with a deep curiosity for the human microbiome and how it shapes human health, and I enjoy making microbiome science more accessible through research and writing. With 2 years experience in microbiome research, I have curated microbiome studies, analyzed microbial signatures, and now focus on interventions as a Microbiome Signatures and Interventions Research Coordinator.

    Read More

Last Updated: 2026-01-05

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Divine Aleru

I am a biochemist with a deep curiosity for the human microbiome and how it shapes human health, and I enjoy making microbiome science more accessible through research and writing. With 2 years experience in microbiome research, I have curated microbiome studies, analyzed microbial signatures, and now focus on interventions as a Microbiome Signatures and Interventions Research Coordinator.

What was studied?

This paper reported an experimental study that investigated how the antibacterial lectin RegIIIγ controls the spatial relationship between intestinal microbiota and the host epithelium. The authors directly tested the hypothesis that immune-mediated spatial segregation, rather than changes in overall microbial composition, is a key mechanism that preserves intestinal homeostasis. Using genetic, imaging, and microbiological approaches, the study focused on defining how epithelial innate immune signaling regulates where microbes reside in the small intestine and how this positioning affects downstream immune activation.

Who was studied?

The study was conducted primarily in mice, including wild-type animals, RegIIIγ-deficient mice, and mice with targeted deletions or reconstitution of MyD88 signaling in intestinal epithelial cells. These animal models were co-housed to control for microbiota composition. The investigators examined the distal small intestine, particularly the ileum, where RegIIIγ expression is highest. Although no human subjects were directly studied, the work was designed to model fundamental host–microbiota interactions that are highly conserved across mammals.

What were the most important findings?

The study demonstrated that RegIIIγ is essential for maintaining a physical buffer zone of approximately 50 micrometers between intestinal bacteria and the epithelial surface. Fluorescence in situ hybridization imaging on page 2 showed that, in wild-type mice, most bacteria remain spatially separated from the epithelium, whereas this separation collapsed in RegIIIγ-deficient animals, allowing bacteria to directly contact the mucosal surface. Importantly, this loss of segregation occurred without major changes in total luminal bacterial load or overall community composition, indicating that RegIIIγ regulates microbial location rather than abundance. Quantitative PCR data on page 3 revealed that RegIIIγ selectively restricted mucosa-associated Gram-positive bacteria, with notable expansion of Firmicutes such as Eubacterium rectale and segmented filamentous bacteria at the epithelial surface. Gram-negative Bacteroidetes were largely unaffected, underscoring the specificity of RegIIIγ activity. The immune consequences of disrupted spatial segregation were substantial. As shown in the adaptive immune analyses on pages 4 and 10, RegIIIγ-deficient mice exhibited increased IgA-producing cells, elevated fecal IgA levels, and heightened Th1 responses characterized by increased IFN-γ–producing CD4⁺ T cells. These immune changes disappeared with antibiotic treatment, confirming that they were driven by altered microbiota–host contact rather than intrinsic immune defects.

What are the greatest implications of this study?

For clinicians, this study reframes intestinal immune homeostasis as a problem of microbial proximity rather than microbial presence alone. It suggests that diseases such as inflammatory bowel disease may arise not only from dysbiosis but from failure to maintain proper spatial segregation between microbes and the epithelium. RegIIIγ and related lectins emerge as critical biomarkers and potential therapeutic targets for restoring mucosal immune balance without broadly eradicating beneficial microbes.

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