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Non-digestible oligosaccharides directly regulate host kinome to modulate host inflammatory responses without alterations in the gut microbiota Original paper

Researched by:

  • Divine Aleru ID
    Divine Aleru

    User avatarI am a biochemist with a deep curiosity for the human microbiome and how it shapes human health, and I enjoy making microbiome science more accessible through research and writing. With 2 years experience in microbiome research, I have curated microbiome studies, analyzed microbial signatures, and now focus on interventions as a Microbiome Signatures and Interventions Research Coordinator.

    Read More

December 28, 2025

  • Microbes
    Microbes

    Microbes, short for microorganisms, are tiny living organisms that are ubiquitous in the environment, including on and inside the human body. They play a crucial role in human health and disease, functioning within complex ecosystems in various parts of the body, such as the skin, mouth, gut, and respiratory tract. The human microbiome, which is […]

Researched by:

  • Divine Aleru ID
    Divine Aleru

    User avatarI am a biochemist with a deep curiosity for the human microbiome and how it shapes human health, and I enjoy making microbiome science more accessible through research and writing. With 2 years experience in microbiome research, I have curated microbiome studies, analyzed microbial signatures, and now focus on interventions as a Microbiome Signatures and Interventions Research Coordinator.

    Read More

Last Updated: 2025-12-28

Microbiome Signatures identifies and validates condition-specific microbiome shifts and interventions to accelerate clinical translation. Our multidisciplinary team supports clinicians, researchers, and innovators in turning microbiome science into actionable medicine.

Divine Aleru

I am a biochemist with a deep curiosity for the human microbiome and how it shapes human health, and I enjoy making microbiome science more accessible through research and writing. With 2 years experience in microbiome research, I have curated microbiome studies, analyzed microbial signatures, and now focus on interventions as a Microbiome Signatures and Interventions Research Coordinator.

What was studied?

This study examined the direct impact of non-digestible oligosaccharides (prebiotics) on host immune responses, specifically focusing on their regulation of the host kinome and inflammatory signaling. It investigated how prebiotics modulate immune pathways, such as NF-κB and MAPK signaling, and their effects on inflammation in the absence of gut microbiota changes.

Who was studied?

The study involved human intestinal epithelial cells (Caco-2Bbe1 cells) exposed to prebiotics (inulin and short-chain fructooligosaccharides), along with a murine model of endotoxemia. The focus was on how these prebiotics influenced inflammatory responses and immune signaling pathways without altering the gut microbiota composition.

What were the most important findings?

The most significant finding was that prebiotics, particularly inulin and scFOS, directly modulate the host kinome, altering key signaling pathways involved in inflammation. These prebiotics dampened the inflammatory response to bacterial lipopolysaccharides (LPS) and reduced activation of the MAPK and NF-κB pathways in intestinal epithelial cells. The study revealed that prebiotics can exert these effects in the absence of microbial changes, indicating a direct impact on host immune function. Furthermore, inulin and scFOS induced different signaling cascades, with scFOS affecting multiple immune pathways, including MAPK, TLR, and TGFβ pathways, while inulin specifically influenced MAPK signaling.

What are the greatest implications of this study?

This research highlights the potential of prebiotics as modulators of immune responses, independent of their role in gut microbiota composition. It provides molecular insights into how prebiotics can influence intestinal inflammation through direct signaling mechanisms, offering new avenues for therapeutic interventions in inflammatory conditions. This is particularly relevant for conditions like colitis or other diseases where inflammation and immune tolerance play a central role. The findings could influence the development of targeted prebiotic therapies aimed at modulating inflammation without altering the gut microbiota, which may have significant clinical implications in managing diseases like inflammatory bowel disease (IBD) or obesity-related inflammatory responses. Further research on the structure-function relationship of prebiotics could lead to optimized therapeutic strategies.

Prebiotics

Prebiotics are non-digestible fibers that selectively promote the growth of beneficial gut bacteria, offering a range of health benefits from improved digestion and immune function to enhanced metabolic health. Prebiotics are an essential part of a healthy diet that supports both gut and overall well-being.

Lipopolysaccharide (LPS)

Lipopolysaccharide (LPS), a potent endotoxin present in the outer membrane of Gram-negative bacteria that causes chronic immune responses associated with inflammation.

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