Microbiome Dependent Regulation of Tregs and Th17 Cells in Mucosa Original paper

Researched by:

  • Divine Aleru ID
    Divine Aleru

    User avatarI am a biochemist with a deep curiosity for the human microbiome and how it shapes human health, and I enjoy making microbiome science more accessible through research and writing. With 2 years experience in microbiome research, I have curated microbiome studies, analyzed microbial signatures, and now focus on interventions as a Microbiome Signatures and Interventions Research Coordinator.

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January 5, 2026

Researched by:

  • Divine Aleru ID
    Divine Aleru

    User avatarI am a biochemist with a deep curiosity for the human microbiome and how it shapes human health, and I enjoy making microbiome science more accessible through research and writing. With 2 years experience in microbiome research, I have curated microbiome studies, analyzed microbial signatures, and now focus on interventions as a Microbiome Signatures and Interventions Research Coordinator.

    Read More

Last Updated: 2026-01-05

Microbiome Signatures identifies and validates condition-specific microbiome shifts and interventions to accelerate clinical translation. Our multidisciplinary team supports clinicians, researchers, and innovators in turning microbiome science into actionable medicine.

Divine Aleru

I am a biochemist with a deep curiosity for the human microbiome and how it shapes human health, and I enjoy making microbiome science more accessible through research and writing. With 2 years experience in microbiome research, I have curated microbiome studies, analyzed microbial signatures, and now focus on interventions as a Microbiome Signatures and Interventions Research Coordinator.

What was reviewed?

This paper reviewed how resident microbiota regulate the balance, function, and plasticity of regulatory T cells (Tregs) and Th17 cells across mucosal surfaces, with a primary focus on the gastrointestinal tract and extensions to oral, pulmonary, vaginal, and other mucosae. The authors synthesized mechanistic, cellular, and molecular evidence to explain how commensal microbes act as continuous immune educators rather than passive colonizers. The review framed the Treg–Th17 axis as a central immune switch that determines whether mucosal immunity remains protective and tolerant or shifts toward chronic inflammation, infection susceptibility, or immunopathology. By integrating data from immunology, microbiology, and inflammatory disease research, the article positioned microbiome-dependent immune regulation as a foundational principle of mucosal homeostasis rather than a disease-specific phenomenon.

Who was reviewed?

The review incorporated evidence from both human and animal studies. Human data were drawn from healthy individuals and patients with inflammatory bowel disease, HIV infection, periodontal disease, asthma, chronic obstructive pulmonary disease, autoimmune disorders, and cancer. These observations were paired with extensive mechanistic work in germ-free mice, antibiotic-treated mice, gnotobiotic models, and genetically modified animals lacking key immune signaling molecules such as MyD88, ATG16L1, NOD2, and IL-17 family members. This comparative approach allowed the authors to distinguish microbiome-dependent immune mechanisms from host-intrinsic immune programs.

What were the most important findings?

The review established that mucosal Tregs and Th17 cells are profoundly shaped by the presence, composition, and metabolic activity of resident microbiota. Major microbial associations included Firmicutes and Bacteroidetes as dominant regulators of immune balance, with specific taxa such as Clostridium clusters IV and XIVa, Bacteroides fragilis, Faecalibacterium prausnitzii, Bifidobacterium species, Lactobacillus species, and segmented filamentous bacteria exerting distinct effects on Treg and Th17 differentiation. Microbial metabolites, particularly short-chain fatty acids such as acetate, propionate, and butyrate, emerged as critical molecular mediators that promote Foxp3⁺ Treg induction, regulate Th17 effector programs, and stabilize epithelial barrier integrity. The review highlighted that commensal-driven signaling through pathways including TLR–MyD88, autophagy-related genes, retinoic acid metabolism, and mTOR integrates microbial cues into immune cell fate decisions. Dysbiosis consistently disrupted this balance, leading to excessive Th17-driven inflammation, dysfunctional Tregs, impaired IgA responses, and loss of colonization resistance. These immune shifts were linked to inflammatory bowel disease, oral and vaginal infections, asthma, metabolic inflammation, immune senescence, and cancer progression.

What are the greatest implications of this review?

For clinicians, the review underscores that many mucosal inflammatory and infectious diseases reflect breakdowns in microbiome-regulated immune balance rather than isolated immune defects. It supports microbiome-aware strategies that preserve or restore Treg–Th17 equilibrium as a core therapeutic goal, emphasizing that immune modulation without addressing microbial context is likely to remain incomplete.

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