Research Feeds

View All
Characterizing the gut microbiota in females with infertility and preliminary results of a water-soluble dietary fiber intervention study A prebiotic dietary pilot intervention restores faecal metabolites and may be neuroprotective in Parkinson’s Disease Diagnosis of the menopause: NICE guidance and quality standards Causes of Death in End-Stage Kidney Disease: Comparison Between the United States Renal Data System and a Large Integrated Health Care System Factors affecting the absorption and excretion of lead in the rat Factors associated with age at menarche, menstrual knowledge, and hygiene practices among schoolgirls in Sharjah, UAE Cadmium transport in blood serum The non-pathogenic Escherichia coli strain Nissle 1917 – features of a versatile probiotic Structured Exercise Benefits in Euthyroid Graves’ Disease: Improved Capacity, Fatigue, and Relapse Gut Microbiota Regulate Motor Deficits and Neuroinflammation in a Model of Parkinson’s Disease A Pilot Microbiota Study in Parkinson’s Disease Patients versus Control Subjects, and Effects of FTY720 and FTY720-Mitoxy Therapies in Parkinsonian and Multiple System Atrophy Mouse Models Dysbiosis of the Saliva Microbiome in Patients With Polycystic Ovary Syndrome Integrated Microbiome and Host Transcriptome Profiles Link Parkinson’s Disease to Blautia Genus: Evidence From Feces, Blood, and Brain Gut microbiota modulation: a narrative review on a novel strategy for prevention and alleviation of ovarian aging Long-term postmenopausal hormone therapy and endometrial cancer

Gut microbiota composition and functional prediction in diarrhea-predominant irritable bowel syndrome Original paper

August 11, 2025

  • Irritable Bowel Syndrome (IBS)
    Irritable Bowel Syndrome (IBS)

    Irritable Bowel Syndrome (IBS) is a common gastrointestinal disorder characterized by symptoms such as abdominal pain, bloating, and altered bowel habits. Recent research has focused on the gut microbiota's role in IBS, aiming to identify specific microbial signatures associated with the condition.

Last Updated: 2021-01-01

Microbiome Signatures identifies and validates condition-specific microbiome shifts and interventions to accelerate clinical translation. Our multidisciplinary team supports clinicians, researchers, and innovators in turning microbiome science into actionable medicine.

Karen Pendergrass

Karen Pendergrass is a microbiome researcher specializing in microbiome-targeted interventions (MBTIs). She systematically analyzes scientific literature to identify microbial patterns, develop hypotheses, and validate interventions. As the founder of the Microbiome Signatures Database, she bridges microbiome research with clinical practice. In 2012, based on her own investigative research, she became the first documented case of FMT for Celiac Disease—four years before the first published case study.

Location
China
Sample Site
Feces
Species
Homo sapiens

What was studied?

This study investigated the gut microbiota composition and functional prediction in patients with diarrhea-predominant irritable bowel syndrome (IBS-D) compared to healthy controls in Nanchang, China. It aimed to identify differences in microbial diversity, composition, and functional metabolic pathways using 16S rRNA sequencing and PICRUSt analysis. The study included 30 IBS-D patients and 30 healthy controls and examined the relative abundance of various microbial taxa, alpha and beta diversity measures, and predicted functional capabilities of the microbiome.

Who was studied?

The study focused on 30 patients diagnosed with diarrhea-predominant IBS (IBS-D) based on Rome IV criteria, alongside 30 healthy controls. Participants ranged in age from 20 to 64 years and were recruited from Nanchang, China. All participants were screened to exclude conditions like inflammatory bowel disease, peptic ulcer, and recent antibiotic or probiotic use to avoid confounding factors.

What were the most important findings?

The study found that gut microbiota richness, but not diversity, was decreased in IBS-D patients compared to healthy controls. At the phylum level, there was a significant decrease in Firmicutes, Fusobacteria, and Actinobacteria, alongside an increase in Proteobacteria in IBS-D patients. At the genus level, Enterobacteriaceae significantly increased, while Alloprevotella and Fusobacterium significantly decreased. Functional predictions using PICRUSt analysis showed up-regulation in pathways associated with cofactor and vitamin metabolism, xenobiotics biodegradation, and metabolism, while environmental adaptation, cell growth, and death pathways were down-regulated. These shifts suggest that microbial imbalances in IBS-D patients may contribute to inflammation, altered metabolism, and disrupted gut barrier function. Additionally, Proteobacteria, identified as a potential microbial signature of disease, was notably elevated, indicating a possible role in driving inflammation in the gut of IBS-D patients.

ParameterIBS-D Patients
Alpha DiversityDecreased richness; no change in diversity
Phylum-Level Changes↓ Firmicutes, Fusobacteria, Actinobacteria; ↑ Proteobacteria
Genus-Level Changes↑ Enterobacteriaceae; ↓ Alloprevotella, Fusobacterium
Functional Pathways (PICRUSt)↑ Metabolism of cofactors, vitamins, and xenobiotics; ↓ Environmental adaptation, cell growth, and death
Microbial SignatureElevated Proteobacteria linked to inflammation
Inflammatory MarkersAssociated with increased Proteobacteria
Therapeutic ImplicationsPotential for microbiome-targeted therapy and dietary interventions

What are the greatest implications of this study?

The findings underscore the significant role of microbiome alterations in the pathogenesis of IBS-D, highlighting Proteobacteria as a potential microbial marker of disease activity. The functional predictions suggest that dysbiosis in IBS-D is not limited to microbial composition but extends to metabolic and detoxification pathways, which may exacerbate symptoms and chronic inflammation. These insights open avenues for microbiome-targeted therapies, such as probiotics, prebiotics, and dietary modifications, aimed at restoring microbial balance and improving patient outcomes. Furthermore, the study emphasizes the need for region-specific microbiome analyses due to geographical variations in gut flora.

Irritable Bowel Syndrome (IBS)

Irritable Bowel Syndrome (IBS) is a common gastrointestinal disorder characterized by symptoms such as abdominal pain, bloating, and altered bowel habits. Recent research has focused on the gut microbiota's role in IBS, aiming to identify specific microbial signatures associated with the condition.

Join the Roundtable

Contribute to published consensus reports, connect with top clinicians and researchers, and receive exclusive invitations to roundtable conferences.