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Characterizing the gut microbiota in females with infertility and preliminary results of a water-soluble dietary fiber intervention study A prebiotic dietary pilot intervention restores faecal metabolites and may be neuroprotective in Parkinson’s Disease Diagnosis of the menopause: NICE guidance and quality standards Causes of Death in End-Stage Kidney Disease: Comparison Between the United States Renal Data System and a Large Integrated Health Care System Factors affecting the absorption and excretion of lead in the rat Factors associated with age at menarche, menstrual knowledge, and hygiene practices among schoolgirls in Sharjah, UAE Cadmium transport in blood serum The non-pathogenic Escherichia coli strain Nissle 1917 – features of a versatile probiotic Structured Exercise Benefits in Euthyroid Graves’ Disease: Improved Capacity, Fatigue, and Relapse Gut Microbiota Regulate Motor Deficits and Neuroinflammation in a Model of Parkinson’s Disease A Pilot Microbiota Study in Parkinson’s Disease Patients versus Control Subjects, and Effects of FTY720 and FTY720-Mitoxy Therapies in Parkinsonian and Multiple System Atrophy Mouse Models Dysbiosis of the Saliva Microbiome in Patients With Polycystic Ovary Syndrome Integrated Microbiome and Host Transcriptome Profiles Link Parkinson’s Disease to Blautia Genus: Evidence From Feces, Blood, and Brain Gut microbiota modulation: a narrative review on a novel strategy for prevention and alleviation of ovarian aging Long-term postmenopausal hormone therapy and endometrial cancer

Extraintestinal Manifestations in Inflammatory Bowel Disease: From Pathophysiology to Treatment Original paper

Researched by:

  • Divine Aleru ID
    Divine Aleru

    User avatarI am a biochemist with a deep curiosity for the human microbiome and how it shapes human health, and I enjoy making microbiome science more accessible through research and writing. With 2 years experience in microbiome research, I have curated microbiome studies, analyzed microbial signatures, and now focus on interventions as a Microbiome Signatures and Interventions Research Coordinator.

    Read More

December 7, 2025

  • Autoimmune Diseases
    Autoimmune Diseases

    Autoimmune disease is when the immune system mistakenly attacks the body's tissues, often linked to imbalances in the microbiome, which can disrupt immune regulation and contribute to disease development.

Researched by:

  • Divine Aleru ID
    Divine Aleru

    User avatarI am a biochemist with a deep curiosity for the human microbiome and how it shapes human health, and I enjoy making microbiome science more accessible through research and writing. With 2 years experience in microbiome research, I have curated microbiome studies, analyzed microbial signatures, and now focus on interventions as a Microbiome Signatures and Interventions Research Coordinator.

    Read More

Last Updated: 2025-12-07

Microbiome Signatures identifies and validates condition-specific microbiome shifts and interventions to accelerate clinical translation. Our multidisciplinary team supports clinicians, researchers, and innovators in turning microbiome science into actionable medicine.

Divine Aleru

I am a biochemist with a deep curiosity for the human microbiome and how it shapes human health, and I enjoy making microbiome science more accessible through research and writing. With 2 years experience in microbiome research, I have curated microbiome studies, analyzed microbial signatures, and now focus on interventions as a Microbiome Signatures and Interventions Research Coordinator.

What was studied?

This review article explores extraintestinal manifestations (EIMs) in patients with inflammatory bowel disease (IBD), particularly focusing on Crohn’s disease (CD) and ulcerative colitis (UC). EIMs are systemic conditions that occur outside the gastrointestinal tract but are linked to the underlying inflammatory processes of IBD. The study explores the pathophysiology, clinical features, and treatment strategies for various EIMs, which can involve the musculoskeletal, dermatological, ocular, and hepatobiliary systems. It also discusses the mechanisms underlying these manifestations, including immune responses, microbial factors, and genetic predispositions, as well as the impact of therapies used to treat IBD on EIMs.

Who was studied?

The study does not focus on a single cohort but rather synthesizes findings from various studies involving patients with Crohn’s disease and ulcerative colitis. It draws on data from clinical studies, cohort analyses, and patient registries, including large sample sizes, to better understand the prevalence and impact of EIMs in IBD patients. The patients studied were diagnosed with IBD and presented with various extraintestinal manifestations, such as arthritis, uveitis, and hepatobiliary disorders. The study includes data on patients with both active and remission stages of IBD, offering a comprehensive view of how EIMs can occur at different disease stages and how they influence patient quality of life.

Most important findings

The review highlights several key findings related to the pathophysiology and treatment of EIMs. First, it emphasizes that EIMs can arise from immune responses either extending from intestinal inflammation or occurring as independent inflammatory events in organs outside the gastrointestinal tract. This is driven by mechanisms such as immune cross-reactivity, microbial dysbiosis, and genetic susceptibility. Specifically, the article notes that certain microbial communities, such as reduced levels of Coprococcus and Ruminococcus species, are associated with inflammatory arthritis and psoriasis in IBD patients, suggesting a link between gut microbiota alterations and systemic inflammation.

The article also examines the impact of IBD therapies on EIMs, particularly biologics like anti-TNF-α agents, which are effective in managing both IBD and its associated extraintestinal conditions. The review shows that anti-TNF therapies, such as infliximab (IFX) and adalimumab (ADA), have high efficacy in treating musculoskeletal EIMs like arthritis and skin manifestations like pyoderma gangrenosum. However, it also cautions about potential paradoxical effects, where biologics may induce or worsen certain conditions, such as psoriasis or uveitis, in a small subset of patients.

Key implications

The findings underscore the importance of a multidisciplinary approach to managing IBD, given the wide range of potential EIMs. Early identification and appropriate management of these extraintestinal conditions are critical for improving the overall quality of life for IBD patients. The review suggests that treatments should be tailored not only to control intestinal inflammation but also to address systemic manifestations. For example, while biologic therapies like anti-TNF agents can effectively manage both IBD and EIMs, careful monitoring for paradoxical effects is essential. The study advocates for the use of a precision medicine approach, which considers genetic, environmental, and microbiome factors, to better predict and treat EIMs in IBD patients. Future research is needed to explore the role of gut microbiota in EIM pathogenesis further and to develop more targeted therapies that can address both intestinal and systemic manifestations of IBD.

Crohn’s Disease

Crohn's disease is a chronic inflammatory condition of the gastrointestinal tract that can cause a wide range of symptoms, including abdominal pain, diarrhea, and fatigue. The exact cause of the disease remains unclear, but it is believed to result from a combination of genetic predisposition and environmental factors. Although there is no cure, ongoing advancements in medical research continue to improve management strategies and quality of life for those affected by Crohn's disease.

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